Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Gm27320-201ENSMUST00000184892 109 ntBASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Gm38158-201ENSMUST00000194617 339 ntBASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a4Q9QZR9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Gm14381-201ENSMUST00000122105 414 ntBASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Mir5132-201ENSMUST00000175166 71 ntBASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Nsd1-205ENSMUST00000224693 852 ntBASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Snora73a-201ENSMUST00000082453 205 ntBASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.23□□□□□ -0.13
Col4a4Q9QZR9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gm37922-201ENSMUST00000195596 455 ntBASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a4Q9QZR9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Gm11618-201ENSMUST00000117946 267 ntBASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Gm43138-201ENSMUST00000199123 708 ntBASIC14.21□□□□□ -0.13
Col4a4Q9QZR9 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms