Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six6Q9QZ28 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.32□□□□□ -0.44
Six6Q9QZ28 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.32□□□□□ -0.44
Six6Q9QZ28 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six6Q9QZ28 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Gm27011-201ENSMUST00000182352 972 ntBASIC12.31□□□□□ -0.44
Six6Q9QZ28 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.31□□□□□ -0.44
Six6Q9QZ28 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Six6Q9QZ28 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Six6Q9QZ28 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms