Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco4Q9JIS3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm15039-201ENSMUST00000118914 875 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm27405-201ENSMUST00000184201 112 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm7791-201ENSMUST00000219066 539 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco4Q9JIS3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Celf4-206ENSMUST00000224553 1729 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco4Q9JIS3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.65□□□□□ -0.54
Smco4Q9JIS3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms