Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Gm21470-201ENSMUST00000187680 696 ntBASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-4Q9EQM3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-4Q9EQM3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm8463-201ENSMUST00000208573 613 ntBASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-4Q9EQM3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx2-4Q9EQM3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms