Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tubb4aQ9D6F9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tubb4aQ9D6F9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Tubb4aQ9D6F9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tubb4aQ9D6F9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Tubb4aQ9D6F9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tubb4aQ9D6F9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Gm9726-201ENSMUST00000180321 678 ntBASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Tubb4aQ9D6F9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Gm5587-201ENSMUST00000206270 674 ntBASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb4aQ9D6F9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Gm18032-201ENSMUST00000222541 538 ntBASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb4aQ9D6F9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb4aQ9D6F9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.67■□□□□ 0.1
Tubb4aQ9D6F9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms