Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stag1Q9D3E6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.28■□□□□ 0.36
Stag1Q9D3E6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Gm20445-201ENSMUST00000061905 565 ntBASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Mir125a-201ENSMUST00000083545 68 ntBASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stag1Q9D3E6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Gm12859-201ENSMUST00000117834 427 ntBASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stag1Q9D3E6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.27■□□□□ 0.35
Stag1Q9D3E6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stag1Q9D3E6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Stag1Q9D3E6 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.27■□□□□ 0.35
Stag1Q9D3E6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stag1Q9D3E6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Stag1Q9D3E6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 AA619741-201ENSMUST00000195095 646 ntBASIC17.26■□□□□ 0.35
Stag1Q9D3E6 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.26■□□□□ 0.35
Stag1Q9D3E6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Stag1Q9D3E6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms