Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssu72Q9CY97 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44357-201ENSMUST00000195897 142 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm19658-201ENSMUST00000196231 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44367-201ENSMUST00000196836 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44350-201ENSMUST00000197197 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44390-201ENSMUST00000197533 144 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44313-201ENSMUST00000198018 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44486-201ENSMUST00000198508 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44314-201ENSMUST00000199263 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44394-201ENSMUST00000199558 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44484-201ENSMUST00000199873 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44466-201ENSMUST00000200264 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm44359-201ENSMUST00000200671 138 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssu72Q9CY97 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm33142-201ENSMUST00000193913 867 ntBASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm9182-201ENSMUST00000217829 639 ntBASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ssu72Q9CY97 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms