Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Gm1401-201ENSMUST00000122048 772 ntBASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Gm9727-201ENSMUST00000161387 555 ntBASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim11Q99PQ2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Gm14042-201ENSMUST00000120139 833 ntBASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Gm17968-201ENSMUST00000194902 784 ntBASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim11Q99PQ2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.56■□□□□ 0.24
Trim11Q99PQ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim11Q99PQ2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Gm9385-201ENSMUST00000117563 472 ntBASIC16.55■□□□□ 0.24
Trim11Q99PQ2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Gm5364-201ENSMUST00000216789 889 ntBASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim11Q99PQ2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms