Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm29396-201ENSMUST00000185659 716 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm29608-201ENSMUST00000190444 463 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm44364-201ENSMUST00000198368 141 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm13786-201ENSMUST00000122371 333 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Pcdh15Q99PJ1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh15Q99PJ1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm16570-201ENSMUST00000161951 436 ntBASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm18935-201ENSMUST00000212692 664 ntBASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh15Q99PJ1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms