Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf111Q99ML9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.11□□□□□ -0.15
Rnf111Q99ML9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Gm25925-201ENSMUST00000158314 306 ntBASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.11□□□□□ -0.15
Rnf111Q99ML9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.1□□□□□ -0.15
Rnf111Q99ML9 AW822252-206ENSMUST00000208904 237 ntBASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf111Q99ML9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf111Q99ML9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms