Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.25■□□□□ 0.03
Clp1Q99LI9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm18307-201ENSMUST00000206864 949 ntBASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm5425-201ENSMUST00000214125 459 ntBASIC15.25■□□□□ 0.03
Clp1Q99LI9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm5356-201ENSMUST00000093326 615 ntBASIC15.25■□□□□ 0.03
Clp1Q99LI9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.25■□□□□ 0.03
Clp1Q99LI9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Mir1982-201ENSMUST00000157368 74 ntBASIC15.24■□□□□ 0.03
Clp1Q99LI9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.24■□□□□ 0.03
Clp1Q99LI9 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.24■□□□□ 0.03
Clp1Q99LI9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Clp1Q99LI9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.23■□□□□ 0.03
Clp1Q99LI9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Gm6244-201ENSMUST00000178732 841 ntBASIC15.23■□□□□ 0.03
Clp1Q99LI9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.23■□□□□ 0.03
Clp1Q99LI9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.23■□□□□ 0.03
Clp1Q99LI9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clp1Q99LI9 Prob1-201ENSMUST00000097619 3021 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.22■□□□□ 0.03
Clp1Q99LI9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm15957-201ENSMUST00000118893 974 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Mir1894-201ENSMUST00000122802 81 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm17795-201ENSMUST00000214505 757 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm17794-201ENSMUST00000220252 955 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.22■□□□□ 0.03
Clp1Q99LI9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clp1Q99LI9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms