Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.25□□□□□ -0.29
Lims1Q99JW4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lims1Q99JW4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm13597-201ENSMUST00000121239 375 ntBASIC13.25□□□□□ -0.29
Lims1Q99JW4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm16026-204ENSMUST00000162652 683 ntBASIC13.25□□□□□ -0.29
Lims1Q99JW4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lims1Q99JW4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.25□□□□□ -0.29
Lims1Q99JW4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.25□□□□□ -0.29
Lims1Q99JW4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lims1Q99JW4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.24□□□□□ -0.29
Lims1Q99JW4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm37230-201ENSMUST00000194491 818 ntBASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.24□□□□□ -0.29
Lims1Q99JW4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.24□□□□□ -0.29
Lims1Q99JW4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lims1Q99JW4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.23□□□□□ -0.29
Lims1Q99JW4 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.23□□□□□ -0.29
Lims1Q99JW4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.23□□□□□ -0.29
Lims1Q99JW4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms