Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm12490-201ENSMUST00000120255 560 ntBASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm14719-201ENSMUST00000121891 340 ntBASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc1bQ920F6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm44855-201ENSMUST00000205725 362 ntBASIC16.8■□□□□ 0.28
Smc1bQ920F6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.8■□□□□ 0.28
Smc1bQ920F6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1bQ920F6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.79■□□□□ 0.28
Smc1bQ920F6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.79■□□□□ 0.28
Smc1bQ920F6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.79■□□□□ 0.28
Smc1bQ920F6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1bQ920F6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Gm14767-201ENSMUST00000121559 586 ntBASIC16.78■□□□□ 0.28
Smc1bQ920F6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Gm10499-201ENSMUST00000174094 934 ntBASIC16.78■□□□□ 0.28
Smc1bQ920F6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1bQ920F6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Syt7-204ENSMUST00000223586 1344 ntBASIC16.77■□□□□ 0.28
Smc1bQ920F6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.77■□□□□ 0.28
Smc1bQ920F6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Smc1bQ920F6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smc1bQ920F6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms