Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha3Q91Y16 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha3Q91Y16 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Gm6973-201ENSMUST00000117080 721 ntBASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha3Q91Y16 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Gm18889-201ENSMUST00000174284 929 ntBASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha3Q91Y16 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdha3Q91Y16 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms