Protein–RNA interactions for Protein: Q91Y14

Pcdha6, Pcdha6 protein, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha6Q91Y14 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdha6Q91Y14 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdha6Q91Y14 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdha6Q91Y14 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Pcdha6Q91Y14 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha6Q91Y14 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms