Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb2Q91Y00 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb2Q91Y00 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb2Q91Y00 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Gm13616-201ENSMUST00000120600 222 ntBASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Gm25948-201ENSMUST00000175334 112 ntBASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb2Q91Y00 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Gm15920-201ENSMUST00000118998 402 ntBASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb2Q91Y00 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb2Q91Y00 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms