Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Gm14363-201ENSMUST00000122304 409 ntBASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb3Q91XZ7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhb3Q91XZ7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb3Q91XZ7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb3Q91XZ7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb3Q91XZ7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb3Q91XZ7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Rubie-203ENSMUST00000227803 2430 ntBASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Gm9519-201ENSMUST00000206108 1337 ntBASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb3Q91XZ7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 AC159246.1-201ENSMUST00000214478 249 ntBASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gm45925-201ENSMUST00000218882 744 ntBASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gm8655-201ENSMUST00000221159 852 ntBASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhb3Q91XZ7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.56□□□□□ -0.08
Pcdhb3Q91XZ7 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms