Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Gm2272-201ENSMUST00000194903 582 ntBASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga3Q91XY5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga3Q91XY5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Gm5364-201ENSMUST00000216789 889 ntBASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga3Q91XY5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga3Q91XY5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga3Q91XY5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga3Q91XY5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.96□□□□□ -0.34
Pcdhga3Q91XY5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga3Q91XY5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms