Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx1Q91VR5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.04■□□□□ -0
Ddx1Q91VR5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.04■□□□□ -0
Ddx1Q91VR5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx1Q91VR5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx1Q91VR5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx1Q91VR5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.04■□□□□ -0
Ddx1Q91VR5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx1Q91VR5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.03■□□□□ -0
Ddx1Q91VR5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.03■□□□□ -0
Ddx1Q91VR5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.03■□□□□ -0
Ddx1Q91VR5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Ddx1Q91VR5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.03■□□□□ -0
Ddx1Q91VR5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.03■□□□□ -0
Ddx1Q91VR5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.03■□□□□ -0
Ddx1Q91VR5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm20553-201ENSMUST00000204205 844 ntBASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.03■□□□□ -0
Ddx1Q91VR5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx1Q91VR5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ddx1Q91VR5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx1Q91VR5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ddx1Q91VR5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ddx1Q91VR5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.02■□□□□ -0
Ddx1Q91VR5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.02■□□□□ -0
Ddx1Q91VR5 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.02■□□□□ -0
Ddx1Q91VR5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.02■□□□□ -0
Ddx1Q91VR5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.02■□□□□ -0
Ddx1Q91VR5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ddx1Q91VR5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx1Q91VR5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx1Q91VR5 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.02□□□□□ -0.01
Ddx1Q91VR5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Gm15483-201ENSMUST00000120338 456 ntBASIC15.01□□□□□ -0.01
Ddx1Q91VR5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ddx1Q91VR5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms