Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim29Q8R2Q0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Gm23547-201ENSMUST00000158210 271 ntBASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Gm8000-201ENSMUST00000188378 592 ntBASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim29Q8R2Q0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Gm14494-201ENSMUST00000118786 435 ntBASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Rpph1-201ENSMUST00000175096 319 ntBASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Gm27525-201ENSMUST00000184465 107 ntBASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim29Q8R2Q0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Gm45098-201ENSMUST00000207179 657 ntBASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim29Q8R2Q0 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.58■□□□□ 0.25
Trim29Q8R2Q0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim29Q8R2Q0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim29Q8R2Q0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim29Q8R2Q0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms