Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim2Q8R1G6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim2Q8R1G6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim2Q8R1G6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim2Q8R1G6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Gm43061-201ENSMUST00000198850 2241 ntBASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim2Q8R1G6 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim2Q8R1G6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim2Q8R1G6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms