Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gm13223-201ENSMUST00000118609 747 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gm10275-202ENSMUST00000168697 495 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Auts2-212ENSMUST00000178555 309 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gm10275-201ENSMUST00000092620 635 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rpp40Q8R1F9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rpp40Q8R1F9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Gm14042-201ENSMUST00000120139 833 ntBASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Gm27631-201ENSMUST00000184163 466 ntBASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rpp40Q8R1F9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rpp40Q8R1F9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms