Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sf3a1Q8K4Z5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Gm25287-201ENSMUST00000103846 110 ntBASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Gm22918-201ENSMUST00000103855 110 ntBASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Gm37230-201ENSMUST00000194491 818 ntBASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Gm9182-201ENSMUST00000217829 639 ntBASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sf3a1Q8K4Z5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Gm8396-201ENSMUST00000057361 823 ntBASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sf3a1Q8K4Z5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3a1Q8K4Z5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sf3a1Q8K4Z5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3a1Q8K4Z5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms