Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm44397-201ENSMUST00000195950 113 ntBASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col23a1Q8K4G2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col23a1Q8K4G2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col23a1Q8K4G2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Mir877-201ENSMUST00000104738 85 ntBASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gm37008-201ENSMUST00000195712 319 ntBASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gm18753-201ENSMUST00000201000 566 ntBASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.41■□□□□ 0.38
Col23a1Q8K4G2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Gm15371-201ENSMUST00000117057 784 ntBASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Gm13385-201ENSMUST00000121089 220 ntBASIC17.4■□□□□ 0.38
Col23a1Q8K4G2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms