Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.73□□□□□ -0.21
Clrn1Q8K445 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.73□□□□□ -0.21
Clrn1Q8K445 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.73□□□□□ -0.21
Clrn1Q8K445 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Clrn1Q8K445 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.72□□□□□ -0.21
Clrn1Q8K445 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn1Q8K445 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm6973-201ENSMUST00000117080 721 ntBASIC13.71□□□□□ -0.21
Clrn1Q8K445 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm11543-201ENSMUST00000120758 370 ntBASIC13.71□□□□□ -0.21
Clrn1Q8K445 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.71□□□□□ -0.21
Clrn1Q8K445 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.71□□□□□ -0.21
Clrn1Q8K445 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn1Q8K445 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn1Q8K445 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn1Q8K445 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn1Q8K445 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn1Q8K445 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn1Q8K445 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn1Q8K445 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.7□□□□□ -0.22
Clrn1Q8K445 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms