Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Gm7284-201ENSMUST00000131667 944 ntBASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lrrtm1Q8K377 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Gm12895-201ENSMUST00000122214 226 ntBASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Gm6296-201ENSMUST00000222599 943 ntBASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lrrtm1Q8K377 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Gm12644-201ENSMUST00000119935 606 ntBASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lrrtm1Q8K377 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms