Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC9.16□□□□□ -0.94
Cystm1Q8K353 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm44454-201ENSMUST00000198541 138 ntBASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Rps4l-201ENSMUST00000071745 943 ntBASIC9.16□□□□□ -0.94
Cystm1Q8K353 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm45779-201ENSMUST00000212189 4064 ntBASIC9.16□□□□□ -0.94
Cystm1Q8K353 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.16□□□□□ -0.94
Cystm1Q8K353 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Cystm1Q8K353 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.15□□□□□ -0.94
Cystm1Q8K353 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.15□□□□□ -0.94
Cystm1Q8K353 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 AC114585.2-202ENSMUST00000228094 426 ntBASIC9.15□□□□□ -0.94
Cystm1Q8K353 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC9.15□□□□□ -0.94
Cystm1Q8K353 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cystm1Q8K353 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cystm1Q8K353 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cystm1Q8K353 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms