Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Shtn1Q8K2Q9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Gm37230-201ENSMUST00000194491 818 ntBASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Shtn1Q8K2Q9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Shtn1Q8K2Q9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Shtn1Q8K2Q9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Gm6916-202ENSMUST00000205523 195 ntBASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.08■□□□□ 0.32
Shtn1Q8K2Q9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shtn1Q8K2Q9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms