Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm37292-201ENSMUST00000192062 758 ntBASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Hist3h2bbQ8CGP0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Mir6404-201ENSMUST00000183699 94 ntBASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm7514-201ENSMUST00000209475 934 ntBASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Hist3h2bbQ8CGP0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm29707-201ENSMUST00000196325 491 ntBASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hist3h2bbQ8CGP0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms