Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim52Q8CDV4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Gm12091-201ENSMUST00000146791 830 ntBASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.85■□□□□ 0.45
Trim52Q8CDV4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Gm19220-201ENSMUST00000222682 803 ntBASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim52Q8CDV4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim52Q8CDV4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Gm4804-201ENSMUST00000182234 999 ntBASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim52Q8CDV4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Gm5354-201ENSMUST00000182417 973 ntBASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim52Q8CDV4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms