Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm14822-201ENSMUST00000122247 291 ntBASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcpip1Q8CDG3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcpip1Q8CDG3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Gm8749-201ENSMUST00000117737 331 ntBASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Gm13597-201ENSMUST00000121239 375 ntBASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.61■□□□□ 0.09
Vcpip1Q8CDG3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms