Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Olfr286-202ENSMUST00000205305 969 ntBASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lysmd4Q8CC84 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Gm13418-201ENSMUST00000119097 944 ntBASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Gm6089-201ENSMUST00000197666 938 ntBASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lysmd4Q8CC84 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lysmd4Q8CC84 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Gm2451-201ENSMUST00000199447 999 ntBASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Gm10290-201ENSMUST00000200451 999 ntBASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lysmd4Q8CC84 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms