Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shisa4Q8CA71 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Shisa4Q8CA71 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Shisa4Q8CA71 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shisa4Q8CA71 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Gm24543-201ENSMUST00000103867 82 ntBASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Gm6888-201ENSMUST00000221983 706 ntBASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shisa4Q8CA71 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.82■□□□□ 0.28
Shisa4Q8CA71 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm12882-201ENSMUST00000121696 517 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Mir1897-201ENSMUST00000122581 272 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm27306-201ENSMUST00000183970 107 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm27430-201ENSMUST00000184585 107 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm44333-201ENSMUST00000197168 107 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm43703-201ENSMUST00000200523 763 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.81■□□□□ 0.28
Shisa4Q8CA71 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.8■□□□□ 0.28
Shisa4Q8CA71 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa4Q8CA71 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Shisa4Q8CA71 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms