Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Mir3102-201ENSMUST00000175555 104 ntBASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Gm18307-201ENSMUST00000206864 949 ntBASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.5■□□□□ 0.23
Rtp1Q8C8C1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Rtp1Q8C8C1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Gm15460-201ENSMUST00000118147 391 ntBASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Gm14660-201ENSMUST00000119809 575 ntBASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Gm18827-201ENSMUST00000188341 790 ntBASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtp1Q8C8C1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm27486-201ENSMUST00000184923 80 ntBASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm5279-201ENSMUST00000199575 745 ntBASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtp1Q8C8C1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtp1Q8C8C1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms