Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Gm13453-201ENSMUST00000118708 357 ntBASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Gm15957-201ENSMUST00000118893 974 ntBASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Alx1Q8C8B0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Gm15653-201ENSMUST00000119247 907 ntBASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Gm6888-201ENSMUST00000221983 706 ntBASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Alx1Q8C8B0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Mir1897-201ENSMUST00000122581 272 ntBASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.91■□□□□ 0.3
Alx1Q8C8B0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Alx1Q8C8B0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Gm14767-201ENSMUST00000121559 586 ntBASIC16.9■□□□□ 0.3
Alx1Q8C8B0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Alx1Q8C8B0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms