Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col6a6Q8C6K9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a6Q8C6K9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a6Q8C6K9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a6Q8C6K9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a6Q8C6K9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Col6a6Q8C6K9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gm15806-201ENSMUST00000120696 955 ntBASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Mir1894-201ENSMUST00000122802 81 ntBASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gm45331-201ENSMUST00000209868 554 ntBASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a6Q8C6K9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a6Q8C6K9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.06□□□□□ -0.32
Col6a6Q8C6K9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms