Protein–RNA interactions for Protein: Q8BUY9

Pggt1b, Geranylgeranyl transferase type-1 subunit beta, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pggt1bQ8BUY9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Pggt1bQ8BUY9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm15483-201ENSMUST00000120338 456 ntBASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm1401-201ENSMUST00000122048 772 ntBASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.42□□□□□ -0.1
Pggt1bQ8BUY9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pggt1bQ8BUY9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pggt1bQ8BUY9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms