Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Gm5187-201ENSMUST00000117317 991 ntBASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Olfr582-201ENSMUST00000098212 960 ntBASIC18.76■□□□□ 0.59
Col16a1Q8BLX7 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm6983-201ENSMUST00000214912 628 ntBASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm7172-201ENSMUST00000218047 1152 ntBASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col16a1Q8BLX7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Gm18222-201ENSMUST00000202416 1387 ntBASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Gm27572-201ENSMUST00000183702 255 ntBASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col16a1Q8BLX7 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col16a1Q8BLX7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Gm24644-201ENSMUST00000157114 139 ntBASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.72■□□□□ 0.59
Col16a1Q8BLX7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms