Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.42□□□□□ -0.26
Pif1Q80SX8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.42□□□□□ -0.26
Pif1Q80SX8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.42□□□□□ -0.26
Pif1Q80SX8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.42□□□□□ -0.26
Pif1Q80SX8 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.42□□□□□ -0.26
Pif1Q80SX8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.41□□□□□ -0.26
Pif1Q80SX8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Shd-206ENSMUST00000225145 998 ntBASIC13.41□□□□□ -0.26
Pif1Q80SX8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pif1Q80SX8 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.4□□□□□ -0.26
Pif1Q80SX8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.4□□□□□ -0.26
Pif1Q80SX8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms