Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Sh3d21Q7TSG5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3d21Q7TSG5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3d21Q7TSG5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3d21Q7TSG5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Gm15483-201ENSMUST00000120338 456 ntBASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3d21Q7TSG5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3d21Q7TSG5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Gm2213-201ENSMUST00000197485 688 ntBASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Gm15823-201ENSMUST00000064305 670 ntBASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3d21Q7TSG5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3d21Q7TSG5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms