Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Carlr-201ENSMUST00000181515 2574 ntBASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Gm27533-201ENSMUST00000183800 152 ntBASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nphp3Q7TNH6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nphp3Q7TNH6 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.64■□□□□ 0.42
Nphp3Q7TNH6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nphp3Q7TNH6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nphp3Q7TNH6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Gm27306-201ENSMUST00000183970 107 ntBASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp3Q7TNH6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm8410-201ENSMUST00000117225 605 ntBASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm12428-201ENSMUST00000119844 727 ntBASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm27680-201ENSMUST00000184192 160 ntBASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm20949-201ENSMUST00000206478 952 ntBASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Nphp3Q7TNH6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nphp3Q7TNH6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms