Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gm18049-201ENSMUST00000208909 581 ntBASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slc46a1Q6PEM8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Gm17837-201ENSMUST00000186435 985 ntBASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Gm38294-201ENSMUST00000192831 381 ntBASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc46a1Q6PEM8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Gm15693-201ENSMUST00000120470 637 ntBASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Gm27618-201ENSMUST00000183671 60 ntBASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc46a1Q6PEM8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms