Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sdc3Q64519 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Fgf17-202ENSMUST00000227123 1336 ntBASIC14□□□□□ -0.17
Sdc3Q64519 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Gm11543-201ENSMUST00000120758 370 ntBASIC14□□□□□ -0.17
Sdc3Q64519 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14□□□□□ -0.17
Sdc3Q64519 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14□□□□□ -0.17
Sdc3Q64519 Gm37171-201ENSMUST00000192636 1185 ntBASIC14□□□□□ -0.17
Sdc3Q64519 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14□□□□□ -0.17
Sdc3Q64519 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sdc3Q64519 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sdc3Q64519 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sdc3Q64519 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.99□□□□□ -0.17
Sdc3Q64519 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.99□□□□□ -0.17
Sdc3Q64519 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.99□□□□□ -0.17
Sdc3Q64519 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.99□□□□□ -0.17
Sdc3Q64519 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Gm5779-201ENSMUST00000218467 910 ntBASIC13.99□□□□□ -0.17
Sdc3Q64519 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.99□□□□□ -0.17
Sdc3Q64519 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Sdc3Q64519 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sdc3Q64519 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Mir449b-201ENSMUST00000104833 80 ntBASIC13.98□□□□□ -0.17
Sdc3Q64519 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.98□□□□□ -0.17
Sdc3Q64519 Gm24158-201ENSMUST00000175263 71 ntBASIC13.98□□□□□ -0.17
Sdc3Q64519 Gm27920-201ENSMUST00000183953 96 ntBASIC13.98□□□□□ -0.17
Sdc3Q64519 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.98□□□□□ -0.17
Sdc3Q64519 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.98□□□□□ -0.17
Sdc3Q64519 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sdc3Q64519 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sdc3Q64519 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms