Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Gm25026-201ENSMUST00000175017 188 ntBASIC10.78□□□□□ -0.68
Foxc1Q61572 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC10.78□□□□□ -0.68
Foxc1Q61572 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.78□□□□□ -0.68
Foxc1Q61572 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.78□□□□□ -0.68
Foxc1Q61572 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.78□□□□□ -0.68
Foxc1Q61572 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.77□□□□□ -0.68
Foxc1Q61572 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.77□□□□□ -0.68
Foxc1Q61572 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Foxc1Q61572 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Gm12008-201ENSMUST00000117791 755 ntBASIC10.77□□□□□ -0.69
Foxc1Q61572 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.77□□□□□ -0.69
Foxc1Q61572 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Gm10175-201ENSMUST00000086013 645 ntBASIC10.77□□□□□ -0.69
Foxc1Q61572 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.77□□□□□ -0.69
Foxc1Q61572 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Foxc1Q61572 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Foxc1Q61572 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Foxc1Q61572 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms