Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.88□□□□□ -0.03
Slc6a4Q60857 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm12428-201ENSMUST00000119844 727 ntBASIC14.88□□□□□ -0.03
Slc6a4Q60857 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm27321-201ENSMUST00000185021 205 ntBASIC14.88□□□□□ -0.03
Slc6a4Q60857 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm7775-201ENSMUST00000218871 853 ntBASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm16476-201ENSMUST00000221544 139 ntBASIC14.88□□□□□ -0.03
Slc6a4Q60857 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slc6a4Q60857 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gm7063-201ENSMUST00000186840 981 ntBASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gm45453-201ENSMUST00000211758 853 ntBASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc6a4Q60857 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.86□□□□□ -0.03
Slc6a4Q60857 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a4Q60857 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a4Q60857 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms