Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm9385-201ENSMUST00000117563 472 ntBASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm8749-201ENSMUST00000117737 331 ntBASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm9727-201ENSMUST00000161387 555 ntBASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5d-4Q5R1F6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm12260-201ENSMUST00000122447 411 ntBASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5d-4Q5R1F6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms