Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Mir3113-201ENSMUST00000175478 76 ntBASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 AW822252-206ENSMUST00000208904 237 ntBASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trdv4Q5R1A3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm11779-201ENSMUST00000118541 368 ntBASIC12□□□□□ -0.49
Trdv4Q5R1A3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm45683-201ENSMUST00000210825 1247 ntBASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12□□□□□ -0.49
Trdv4Q5R1A3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm13233-201ENSMUST00000118760 1443 ntBASIC12□□□□□ -0.49
Trdv4Q5R1A3 Gm13244-201ENSMUST00000118855 1446 ntBASIC12□□□□□ -0.49
Trdv4Q5R1A3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trdv4Q5R1A3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms