Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trim41Q5NCC3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Gm37424-201ENSMUST00000191727 561 ntBASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Gm18624-201ENSMUST00000220966 658 ntBASIC25.12■■□□□ 1.61
Trim41Q5NCC3 AC121804.3-201ENSMUST00000223420 295 ntBASIC25.12■■□□□ 1.61
Trim41Q5NCC3 AC140451.2-201ENSMUST00000228030 664 ntBASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Gm14780-201ENSMUST00000118387 2737 ntBASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Trim41Q5NCC3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Gm18222-201ENSMUST00000202416 1387 ntBASIC25.11■■□□□ 1.61
Trim41Q5NCC3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trim41Q5NCC3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Gm7390-201ENSMUST00000212452 1216 ntBASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Trim41Q5NCC3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Gm12390-201ENSMUST00000117897 397 ntBASIC25.09■■□□□ 1.61
Trim41Q5NCC3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Trim41Q5NCC3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Gm9522-201ENSMUST00000182394 926 ntBASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Trim41Q5NCC3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Trim41Q5NCC3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC25.08■■□□□ 1.6
Trim41Q5NCC3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms