Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.4□□□□□ -0.1
Scn2bQ56A07 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.39□□□□□ -0.11
Scn2bQ56A07 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.39□□□□□ -0.11
Scn2bQ56A07 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.39□□□□□ -0.11
Scn2bQ56A07 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn2bQ56A07 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn2bQ56A07 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.37□□□□□ -0.11
Scn2bQ56A07 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn2bQ56A07 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms