Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccbe1Q3MI99 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccbe1Q3MI99 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Mir5130-201ENSMUST00000175160 84 ntBASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Gm33142-201ENSMUST00000193913 867 ntBASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Gm18032-201ENSMUST00000222541 538 ntBASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccbe1Q3MI99 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccbe1Q3MI99 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccbe1Q3MI99 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccbe1Q3MI99 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccbe1Q3MI99 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccbe1Q3MI99 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms